PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_006689-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 791aa    MW: 87781.8 Da    PI: 8.0469
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_006689-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.2e-05188209223
                    EETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                    kC +C++ F ++ n++rHir H
  NNU_006689-RA 188 KCDKCSREFCSPINYRRHIRIH 209
                    7*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.39187209IPR007087Zinc finger, C2H2
PROSITE patternPS000280189209IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 791 aa     Download sequence    Send to blast
MVTSNLSDRG TALLYTAIQF CLGMPIPILR DCSTPNAMWS EQKFGKPEGS DSIDSFIRQA  60
IGKEPFLSFS RAGDNPVQWI QLLHALDQQG TNKFSKGPKF NDSIEGKERH LGHYNGVNSY  120
TSYSNGVKES IHHINSSGVA VKGTKSASEH MQTLKIPEAV VAFAQAAAKA NDLPGWPLIS  180
PSKAPMQKCD KCSREFCSPI NYRRHIRIHR RSLNIDKDSP KNRDILGVFW DKLSLDQCKE  240
ILSFKNVMLE EVPGSSIIRA LASFIRKLGF SSLPQTYVKA GEALLDVVQA RPSKFPLSSN  300
ELFSILDDAS EKTFLCAGTA DSLQKFVFDG EAGKVGLDMK NVVACTSFLV EQKLVKAWIA  360
DRDAEALRQA EILERRRLKK LRQKEQKSKE QTSGEKMDFK EGLPETYEDL SYSAETSSPV  420
DASNYHSCTP EGSLDHIQHV EPSRLLDIDL EVDTRNHAGF NEPDTEMATG KTNSANCQDD  480
EQQLQQESGR RQVFAARRQL TKPSRGISKG SHSGQMPLAL KVGAIQKHGT YRDQRTTSTS  540
NGHKVWTRKE KHENGEEGLS VKAQRECIDE QEQNGNSELL IGSISVTLGE CSDRCQVDIS  600
AAYIGHCTSD QHVPRRNHTQ EKAIKADYGQ GGIMNRSMVK LWRPVGKHEA GAVMTVQSET  660
RESEREGTEQ ILSNKCHLAP GNIDDNDSES RSFCLTSFSS RVAEAFLAQR WKETIAADHV  720
KLVLFPETGR PGSPGVEDDY SKRNILGNAE NLLTGVGTVE VINTGANKAK FRGKPEKSFK  780
LKYIPKQRSV T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1373380ERRRLKKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010255332.10.0PREDICTED: uncharacterized protein LOC104596043 isoform X1
TrEMBLE0CUZ70.0E0CUZ7_VITVI; Putative uncharacterized protein
STRINGVIT_16s0050g00700.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.11e-106C2H2-like zinc finger protein